Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Protein Metabolic Process (GO:0019538) Genes Targeted by hsa-mir-548c-3p in B-CLL Leukemia Haslinger Cluster 62 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 62. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p GO:0019538 5298 PI4KB phosphatidylinositol 4-kinase, catalytic, beta [Source:HGNC Symbol;Acc:8984] T 2113 ETS1 v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) [Source:HGNC Symbol;Acc:3488] P T 6197 RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Source:HGNC Symbol;Acc:10432] T Yes 9391 CIAO1 cytosolic iron-sulfur protein assembly 1 [Source:HGNC Symbol;Acc:14280] T 9557 CHD1L chromodomain helicase DNA binding protein 1-like [Source:HGNC Symbol;Acc:1916] zzz999 1843 DUSP1 dual specificity phosphatase 1 [Source:HGNC Symbol;Acc:3064] zzz999 Yes 2788 GNG7 guanine nucleotide binding protein (G protein), gamma 7 [Source:HGNC Symbol;Acc:4410] T 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Source:HGNC Symbol;Acc:2745] P T 10472 ZNF238 zinc finger protein 238 [Source:HGNC Symbol;Acc:13030] T 9341 VAMP3 vesicle-associated membrane protein 3 (cellubrevin) [Source:HGNC Symbol;Acc:12644] T 642 BLMH bleomycin hydrolase [Source:HGNC Symbol;Acc:1059] zzz999 Yes 7155 TOP2B topoisomerase (DNA) II beta 180kDa [Source:HGNC Symbol;Acc:11990] zzz999 26065 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24489] T Yes 4194 MDM4 Mdm4 p53 binding protein homolog (mouse) [Source:HGNC Symbol;Acc:6974] T Yes 7402 UTRN utrophin [Source:HGNC Symbol;Acc:12635] T 4208 MEF2C myocyte enhancer factor 2C [Source:HGNC Symbol;Acc:6996] T 3716 JAK1 Janus kinase 1 [Source:HGNC Symbol;Acc:6190] T Yes 208 AKT2 v-akt murine thymoma viral oncogene homolog 2 [Source:HGNC Symbol;Acc:392] zzz999 Yes 4690 NCK1 NCK adaptor protein 1 [Source:HGNC Symbol;Acc:7664] T Yes 5934 RBL2 retinoblastoma-like 2 (p130) [Source:HGNC Symbol;Acc:9894] T 2475 MTOR mechanistic target of rapamycin (serine/threonine kinase) [Source:HGNC Symbol;Acc:3942] zzz999 Yes 3394 IRF8 interferon regulatory factor 8 [Source:HGNC Symbol;Acc:5358] T 10652 YKT6 YKT6 v-SNARE homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16959] T 8801 SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit [Source:HGNC Symbol;Acc:11450] P T 8609 KLF7 Kruppel-like factor 7 (ubiquitous) [Source:HGNC Symbol;Acc:6350] zzz999 57826 RAP2C RAP2C, member of RAS oncogene family [Source:HGNC Symbol;Acc:21165] P T Yes 3799 KIF5B kinesin family member 5B [Source:HGNC Symbol;Acc:6324] zzz999 102 ADAM10 ADAM metallopeptidase domain 10 [Source:HGNC Symbol;Acc:188] T Yes 4149 MAX MYC associated factor X [Source:HGNC Symbol;Acc:6913] T 5788 PTPRC protein tyrosine phosphatase, receptor type, C [Source:HGNC Symbol;Acc:9666] T Yes 6777 STAT5B signal transducer and activator of transcription 5B [Source:HGNC Symbol;Acc:11367] T 10672 GNA13 guanine nucleotide binding protein (G protein), alpha 13 [Source:HGNC Symbol;Acc:4381] T 546 ATRX alpha thalassemia/mental retardation syndrome X-linked [Source:HGNC Symbol;Acc:886] T 7337 UBE3A ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:12496] P T Yes 5576 PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha [Source:HGNC Symbol;Acc:9391] T Yes 5800 PTPRO protein tyrosine phosphatase, receptor type, O [Source:HGNC Symbol;Acc:9678] T Yes 6789 STK4 serine/threonine kinase 4 [Source:HGNC Symbol;Acc:11408] T Yes 7799 PRDM2 PR domain containing 2, with ZNF domain [Source:HGNC Symbol;Acc:9347] T 3738 KCNA3 potassium voltage-gated channel, shaker-related subfamily, member 3 [Source:HGNC Symbol;Acc:6221] T 900 CCNG1 cyclin G1 [Source:HGNC Symbol;Acc:1592] T Yes 8500 PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:HGNC Symbol;Acc:9245] T 8850 KAT2B K(lysine) acetyltransferase 2B [Source:HGNC Symbol;Acc:8638] P T Yes 353376 TICAM2 toll-like receptor adaptor molecule 2 [Source:HGNC Symbol;Acc:21354] T 4601 MXI1 MAX interactor 1 [Source:HGNC Symbol;Acc:7534] T 7428 VHL von Hippel-Lindau tumor suppressor [Source:HGNC Symbol;Acc:12687] T Yes 1024 CDK8 cyclin-dependent kinase 8 [Source:HGNC Symbol;Acc:1779] zzz999 Yes 7150 TOP1 topoisomerase (DNA) I [Source:HGNC Symbol;Acc:11986] T 2673 GFPT1 glutamine--fructose-6-phosphate transaminase 1 [Source:HGNC Symbol;Acc:4241] P T Yes 905 CCNT2 cyclin T2 [Source:HGNC Symbol;Acc:1600] T Yes 4012 LNPEP leucyl/cystinyl aminopeptidase [Source:HGNC Symbol;Acc:6656] P T Yes 6416 MAP2K4 mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:6844] T Yes 54861 SNRK SNF related kinase [Source:HGNC Symbol;Acc:30598] T Yes 7812 CSDE1 cold shock domain containing E1, RNA-binding [Source:HGNC Symbol;Acc:29905] P T 2130 EWSR1 Ewing sarcoma breakpoint region 1 [Source:HGNC Symbol;Acc:3508] zzz999 27291 C10orf28 chromosome 10 open reading frame 28 [Source:HGNC Symbol;Acc:23512] zzz999

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